## Welcome to the RNAbor webserver !

This web server uses the software
RNAbor to compute the number and Boltzmann probability
of the set of secondary structures of a given RNA sequence at base pair
distance `δ` from a given structure. RNAbor was developed by
Eva Freyhult, Vince Moulton and Peter Clote (submitted).
RNAbor computes the number
N^{δ} and partition function Z^{δ} over all
secondary structures of given RNA sequence which are
`δ`-neighbors of a given structure S_{0}. Additionally,
for all values of `δ`,
RNAbor computes the minimum free energy structure, denoted
MFE^{δ} at base pair distance `δ` from the
initial structure. This computation is done
simultaneously for all values of δ ≤ `Δ`,
in time O(`Δ`^{2}*n^{3}) with
O(`Δ`*n^{2}) space requirements.
Further documentation is here.

Please submit your experiments from the Webserver page.