DATA and some python programs to produce distribution of network degree
DATA.tar: tarball of this directory for downloading
Some DATA
index.html: list
of links in this subdirectory
A few fasta files
Lcollosoma.faa
RA1180tRNA.faa
fruA.faa
Tono's R code to produce correlation plot in R
correlationPlot.R
ContactOrderDataForFigure11
corrPlot.R
NormalizedCorrelationMatPlot.eps
normalizedNborPlusContact.csv
notNormalizedCorrelationMatPlot.eps
notNormNborPlusContact.csv
OutputRfamDataForFigure11
outFirstSeqEachFam200.txt
outMFEcontactOrderFirstSeqEachFam200.txt
outNativeContacts_FirstSeqEachFam200.txt
outNborDegreeEntropyContactOrderNativeContacts_RfamFirstSeqEachFamLen200.txt
RfamContactOrderNativeCont.eps
SamplingMethodForNetworkDegreeDistribution
index.html: list of links in this subdirectory
computeDistributionOfNearestNeighbors_py.txt
computeExpNumNearestNhborsFromFASTAfile_py.txt
fruA.faa
Lcollosoma.faa
misc_py.txt
outFruAValues.txt
outLcollValues.txt
outRA1180Values.txt
PLMVd.faa
RA1180tRNA.faa
rna.ps
tmp
toy.faa
vienna_py.txt