ShinyOmics: Exploration of 'Omics' data

Visualization options

Scatter plot of DE (y-axis) of the selected experiments, against metadata variable (x-axis). Use the selectors above to change the experiment, or the metadata. Use the text box to paste a list of genes (one per line) to display only those genes.

Use the brush (draw a rectangle) on the plot to select genes. NOTE: BRUSH DOESN'T WORK WELL WHEN JITTER IS ON

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Brushed Genes:


                
              

Scatter plot of DE from two experiments. Make sure the two experiments are from the same organism. Use the brush on the plot to select genes

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Brushed Genes:


                
              
Download Full Experiment Table

Heatmap of DE of all genes (rows) across all experiments (columns). Dendrograms are based on hierarchical clustering with euclidean distance, and can be turned off.

Principal Component plot showing each experiment as a point along the top two components.

Significant Gene (fold change >2)

Significant Gene (fold change <0.5)

Selected Gene