RNAmutants: Computation of RNA superoptimal secondary structure and boltzmann partition function of RNA mutants. (Joint work with P. Clote)
A Web server is available at http://bioinformatics.bc.edu/clotelab/RNAmutants/

transFold: Prediction of the structure and residue contacts of transmembrane proteins.
A Web server is available at http://bioinformatics.bc.edu/clotelab/transFold/

amsag2c: automatic generation of the C code of the AMSAG algorithm.

Availability :

These softwares are free of charge for academic users and can be obtained by simple request to Jérôme Waldispühl.